If you are planning on upgrading your media 100 to the latest SD version, i would get a used dual g4 and call it done, unless you are planning on upgrading to Media100 HD. A shop that I work for has upgraded to M100 HD and although the hardware acceleration is sweet, the software is wrought with weirdness. Good ideas, bad implementations. It feels like it’s just not quite done and I’m working with a Beta. COnstant crashes and weird behaviors. At the time support was pretty bad as Optibase was looking for a way out. Maybe Boris’s support will be better, but who knows. Plus, you have to pay extra for it.
I don’t want to discourage you from upgrading your Media 100 and a G5, but unless you are going to Media HD I feel that it’s not worth it. Also, Media 100 HD requires top of the line RAID hardware and FCP is a little more scalable. Forget 720/24p at all with Media 100 HD, but that’s probably not important to you anyway. MEdia 100 upscales everything to 1080i so you need a big and fast array. You can get away with a LOT less drive speed in FCP.
The FCP/Kona2 is a good route to go. Aja’s products work very well, and their support is great and happens to also be free (just don’t expect 24/7 service). If you need analog in and out I would suggest with new Kona LH (analog/digital ins and outs SD and HD), or add on an io LA to your Kona2.
Also, even if you could put a Kona 2 and M100 board in one machine, it would leave no room for storage connection (such as a fibre channel or SATA card).
Jeremy
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G5 Dual 2Ghz <> 4GB RAM <> FCP 5.02 <> Kona 2
ATTO 42XS <> Huge Systems 1.25 TB 4105 Fibre