I guess I forgot to explain that part. I did some animation on top of the files, supers, arrows that move around, I tracked some elements, that sort of stuff. That’s why I used AE.
They are low res and I’m fully aware that I cannot expect miracles from them, but the original footage (the low res files I got from the website) play fine in Quicktime and the website’s preview window, it’s only when I import them in AE that they get corrupted.
I don’t have Final Cut Suite, more of a Premiere guy myself, I have Adobe Media Encoder though, I can give that one a try.
Thanks for the suggestion and if after this new info you can think of something else messing up my files please let me know.
David.