Well, I finally resolved the problem! For those that have AJA LHe:
I called AJA tech support and they sent me a text file and told me to follow these steps:
1. Quit FCP and Kona control Panel
2. Take the .txt from the attached (for those that want the txt file, you can email me at crys94ATyahooDOTcom) and go to
3. Library > Applications Support > FCP System Support > Plugins
4. Drop it there, restart, and launch FCP
After that, they told me to download the latest update, KONA LH/LHe Drivers Version 5.1 NDD.
Before dropping in the text file, you might want to try the update first and see if that solves your problem. Ever since I followed these steps, everything has been working great!