Well, things can get tricky with precomps…
Make sure:
*Your precomp has no effects applied, turning them off wont help…you have to delete them.
*each layer inside the precomp is set to cast/receive lights/shadows
*Photoshop layer styles are not used (right click all layers in the precomp go to layer styles -> remove all) I’ve seen this messing things up.
*In the main comp, watch for 2d layers between your precomp and other layers (e.g. your background) 2D layers, will break the 3D “stack”.
If you had all that done before, then all I can think of is to duplicate every camera and lights into the precomp (and don’t collapse it)…it sucks but on some occasions I can’t seem to avoid it.
hope this helps, good luck.