Hi yeah its just very boring and tedious starting from scratch. I figured out that when I re-rig I have to make sure that the root layer i.e. the pelvis for example has to be at position 0,0,0 or the controllers will not attach in the right spot. Also I have noticed that I cannot rotate the master without it screwing the puppet up. I can mover the position but not the rotation.
Another thing is that the whole point of making the puppet in this way is so that I can easily move it around by grabbing hold of a controller and moving it in the comp however unless I grab on the x, y axis it will often accidentally get moved on the z axis which is not good. Is there a way to lock the z axis but still be able to move the controller freely without having to only move one axis at a time?