We’ve had the same problem in varying degrees with SD 8 bit (all codecs — aja, apple, blackmagic) and nearly the identical config – DP 2.7 4G or 8G in both panther and tiger. Medea RT3Xs and CI arrays of cheetahs. Whether i install the system fresh or upgrade. Exactly the type of hits you describe. So far aja has been unable to provide a working config.
This is a HUGE headache – we’re going from one bad system to another it seems – trying to upgrade from G4s with cinewave, whose 24 fps video clips output to 29.97 tape with 3:2 started stuttering after the upgrade to Panther.
So for standard definition 24fps material going to NTSC tape the last good config we had was FCP4.0.2, Cinewave 4.0.2, on a G4 running OS 10.2.8
Not just sad – maddening.
DP1G QS 1.5G RAM Stealth FCP4.5HD, QT 6.5, CW 4.6 ATTO UL3D 8x70G Cheetah 23.98fps Targa Cine YUV OS10.2.8 **** DP2.7 G5 8G FCP4.5HD, QT6.5, OS10.3.9