Larry is one you need to be talking with. He’s the guy who wrote the tool at Rivergate Software and often roams these threads.
You need to be super careful when using Encore to go to replication…..it has tons of issues. I wouldn’t call on anyone but Larry in this situation as you have found out
Personally I believe you should leave a replicated project to a company which does BD specifically. There are too many pitfalls and it will get expensive if things go wrong. Just my opinion….BD production is not DVD….not even close 🙂
Rest assured though…. Call on Larry and he will work it out