So, you done a lot of optical flow work, with other formats and have not seen issues.
Now, you are using a Drift Camera and FCP X and you see issues?
Is this the first time you’ve used FCP X? Or have you seen issues before?
Is this the first time you’ve used the Drift Camera?
What formats have you used before without issues?
Recently, I’ve worked with XDCAM EX and optical flow. Both natively and converted to Pro Res. I didn’t notice much, if any difference between the two formats. I was never able to get acceptable results. I always wound up with warping.
In my case I believe the issue was the source material, not the format. It was a sporting event. So there was a lot of fast motion. People going in one direction, the background moving by slower and people moving in the opposite direction. All this movement, in various directions seemed to overwhelm the optical flow algorithms.
I tired FCP X, Premier Pro and After Effects (which I believe are the same engine) and Twixtor in PP. Twixtor provides more controls and settings, so you can definitely improve over all the other implementations. They do have a trial plug-in you can download. I highly recommend reading their manual and watching their tutorials. If you’ve never used Twixtor.
One thing you should probably consider is conforming your video first. I shot 720 60P and conformed it to 24P, which slows it down to 40% without having the create new frames. Then work with Twixtor, or the other optical flow implementations.