I’m not familiar with your deck and hopefully others will be able to provide some suggestions. I found a copy of the brochure for your deck online.
It appears to have composite and S-video in/out and you’ve also added the optional Firewire module.
I’m not sure why you are using a DeckLink card with this deck as I suspect you will get best results by performing your capture and playback via Firewire and also using Firewire for device control.
You could use a DeckLink SP or DeckLink Extreme to capture and play back via composite analog video. This will allow you to work with uncompressed video if you are applying lots of effects and text but you will be moving between the lossy DVCPRO format and also introducing some analog noise and so a pure DVCPRO workflow via Firewire might be the best option.
In regards to device control, I noted the following comment in the brochure: When using RS-422 control, AJ-D250 serves only as source machine. In other words you won’t be able to edit back to tape using RS-422. So even if you do use a DeckLink card for capture and playback via composite analog video, I would be inclined to change the device control from Sony RS-422 to Apple Firewire. However if you do want to use RS-422 device control, consider switching the preset from Sony RS-422 to Panasonic RS-422 as this should work better.
Regards,
Luke Maslen
Blackmagic Design