Thanks for the response Alex.
I guessed that maybe it wasn’t the intended purpose to bring the whole project into AE. Thing is I also prefer to colour correct and grade in AE as i feel the built in tools are better. Maybe its just because I’m more familiar with AE over Premiere though.
I think what I’ll do is render the couple of clips that have the transitions out of premiere and bring back into AE and render the final thing out of AE like you suggested.
Thanks again for the feedback
Scott