Clayton,
First, I want to thank you for such a detailed response to this – I’m looking to do something similar and this is one of the most informative posts I’ve come across.
My situation is a little simpler, I’m trying to add a GTX 560 card to a 2008 Mac Pro 3.1 machine. I want to keep the original nvidia 8800gt so that OSX will work, and then configure windows to use the new card so that my apps there will get the boost. I don’t have any other PCI devices in the machine and only need to drive one monitor.
Given that, I have only one video power cable slot open, the other is being used by the nvidia. The 560 came with a dual 6 pin molex Y splitter cable. Do I ignore the existing video card power cable slot, and just try and follow your instructions? In other words, I’m going to try and use the power cable from the drive bay, and from there bring the cables down and into the new 560?
Or is there some alternate approach?