It looks perfect viewed with VLC. So, I guess my next question is regarding FCP where I am assembling everything. Will I experience the same problem when I render the final piece out of it?
I finally got it to work by putting all my pre comps and movs (regardless of their position on Z space) at the bottom of the main comp’s layer order. However, I don’t understand why it should have to be this way in order for the 3D to work properly.