I’m not sure I understand the elements that you have or what you trying to get, but I’ll ask some questions that might help.
Does the missile move thru the frame on the original shot or did the shooter track along with it?
If the missile moves thru the original frame then tracking the camera move of your background element and applying that tracking data to the missile footage would get the camera’s movement added to the motion of the missile thru the frame.
By the way, You might want to apply the track to a null and parent the the missile footage to the null, this gives you the ability to make some adjustments to the layer but still have the camera motion.
If your missile does not move thru the original frame then you need to use the null method but add motion thru the frame by animating the missile footage in the way you want. You might animate the missile footage first then parent it to the null layer and check to make sure it is still working for you.
Keep in mind that if your trying to create a shot that looks like someone photographed a missile moving thru some area, that people will not always keep the missile right in the center of the frame. (i.e. they pan over and sightly passed the missile then move back to a better framing as they begin to track along with the missile)
TonyTony